BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F03LP1|AL428933
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1409 1749 0.0
>3x_Contig1409
Length = 9404
Score = 1749 bits (881), Expect = 0.0
Identities = 900/905 (99%), Gaps = 2/905 (0%)
Strand = Plus / Minus
Query: 1 agtatcctgtataatccataatgaaattcagagcc-ggctgaccgtctggtgctggatga 59
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3067 agtatcctgtataatccataatgaaattcagagcccggctgaccgtctggtgctggatga 3008
Query: 60 atgtacggtccattggaggtagtaacgaacagagccttaagacaaggaatgaatgcaata 119
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3007 atgtacggtccattggaggtagtaacgaacagagccttaagccaaggaatgaatgcaata 2948
Query: 120 agtaatgbtaggaaaacagccatcgaacacggtcttaaaaagttcttgaggaagaaaagc 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2947 agtaatgctaggaaaacagccatcgaacacggtcttaaaaagttcttgaggaagaaaagc 2888
Query: 180 agtacactcataccaggaatatttctgactctcgagggtaaaatgttagctgattctttg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2887 agtacactcataccaggaatatttctgactctcgagggtaaaatgttagctgattctttg 2828
Query: 240 atatcttggccagttacggtagcatctgatgtgacaattctcttcaaagttgtgaactct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2827 atatcttggccagttacggtagcatctgatgtgacaattctcttcaaagttgtgaactct 2768
Query: 300 tttctaagagggacctgacctgaatcctcggtttcgggttttatggtggatgtaacagaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2767 tttctaagagggacctgacctgaatcctcggtttcgggttttatggtggatgtaacagaa 2708
Query: 360 tttctgcgagctccgtattggtctacattagagtattcttttattaaatcgtgaacattt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2707 tttctgcgagctccgtattggtctacattagagtattcttttattaaatcgtgaacattt 2648
Query: 420 tccggargcatagatcttaggtcaatcgaccttagcgatgaactgagagactgggcactg 479
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2647 tccggaggcatagatcttaggtcaatcgaccttagcgatgaactgagagactgggcactg 2588
Query: 480 gccgccgttgcattagtaaggcgccttgaaattacattatcctcagcaagctgtattgga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2587 gccgccgttgcattagtaaggcgccttgaaattacattatcctcagcaagctgtattgga 2528
Query: 540 gaagtaacagcttcctgagaattgatggaatttacagcacgatcgttttcttttgaacag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2527 gaagtaacagcttcctgagaattgatggaatttacagcacgatcgttttcttttgaacag 2468
Query: 600 aatgattgtgaatcagtttgaagatgaaactgagatgcattagattgcgcaggtggttcg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2467 aatgattgtgaatcagtttgaagatgaaactgagatgcattagattgcgcaggtggttcg 2408
Query: 660 agtggtgtctgaatagaggcattctcctcatccgcgtactcgaaatccatttctataagt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2407 agtggtgtctgaatagaggcattctcctcatccgcgtactcgaaatccatttctataagt 2348
Query: 720 ctaaagcctcctaagttgaagatgcaaatcataaacatggccaagaaaataatcacagaa 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2347 ctaaagcctcctaagttgaagatgcaaatcataaacatggccaagaaaataatcacagaa 2288
Query: 780 gcaatacccttatctgcttcttcttctgtgaaaagaagaccttgatccatagtttgtaat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2287 gcaatacccttatctgcttcttcttctgtgaaaagaagaccttgatccatagtttgtaat 2228
Query: 840 atagcgattggtaaatcactgatatttggggaatgtcccaccggctaatataccaccacg 899
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2227 atagcgattggtaaatcactgatattt-gggaatgtcccaccggctaatataccaccacg 2169
Query: 900 ccatt 904
|||||
Sbjct: 2168 ccatt 2164
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6815
Number of Sequences: 1807
Number of extensions: 6815
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)